Index
A
|
C
|
D
|
E
|
F
|
G
|
H
|
L
|
M
|
N
|
O
|
P
|
R
|
S
|
T
A
Alignment (class in mygfa)
AlignOp (class in mygfa)
C
chop() (mygfa.Strand method)
D
drop_overlaps() (mygfa.Path method)
E
emit() (mygfa.Graph method)
F
from_ (mygfa.Link attribute)
G
Graph (class in mygfa)
H
Handle (class in mygfa)
headers (mygfa.Graph attribute)
L
Link (class in mygfa)
links (mygfa.Graph attribute)
linkstr() (mygfa.Handle method)
M
module
mygfa
mygfa
module
N
name (mygfa.Handle attribute)
(mygfa.Path attribute)
(mygfa.Segment attribute)
O
olaps (mygfa.Path attribute)
ori (mygfa.Handle attribute)
overlap (mygfa.Link attribute)
P
parse() (mygfa.Alignment class method)
(mygfa.Graph class method)
(mygfa.Handle class method)
(mygfa.Link class method)
(mygfa.Path class method)
(mygfa.Segment class method)
(mygfa.Strand class method)
parse_inner() (mygfa.Link class method)
(mygfa.Path class method)
(mygfa.Segment class method)
Path (class in mygfa)
paths (mygfa.Graph attribute)
R
rev() (mygfa.Handle method)
(mygfa.Link method)
revcomp() (mygfa.Segment method)
(mygfa.Strand method)
S
Segment (class in mygfa)
segments (mygfa.Graph attribute)
(mygfa.Path attribute)
seq (mygfa.Segment attribute)
Strand (class in mygfa)
T
to_ (mygfa.Link attribute)
mygfa
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